@CONFERENCE\{IMM2011-06053, author = "T. H. Mosbech and K. A. Pilgaard and A. Vaag and R. Larsen", title = "Automatic Segmentation of Abdominal Adipose Tissue in {MRI}", year = "2011", pages = "501-511", booktitle = "Proceedings on the Scandinavian Conference on Image Analysis, Ystad, Sweden", volume = "", series = "Lecture Notes in Computer Science", editor = "", publisher = "Springer", organization = "", address = "", note = "{DOI} 10.1007/978-3-642-21227-7", url = "http://www2.compute.dtu.dk/pubdb/pubs/6053-full.html", abstract = "This paper presents a method for automatically segmenting abdominal adipose tissue from {3-}dimensional magnetic resonance images. We distinguish between three types of adipose tissue; visceral, deep subcutaneous and superficial subcutaneous. Images are pre-processed to remove the bias field effect of intensity in-homogeneities. This effect is estimated by a thin plate spline extended to fit two classes of automatically sampled intensity points in {3D}. Adipose tissue pixels are labelled with fuzzy c-means clustering and locally determined thresholds. The visceral and subcutaneous adipose tissue are separated using deformable models, incorporating information from the clustering. The subcutaneous adipose tissue is subdivided into a deep and superficial part by means of dynamic programming applied to a spatial transformation of the image data. Regression analysis shows good correspondences between our results and total abdominal adipose tissue percentages assessed by dualemission {X-}ray absorptiometry (R2 = 0.86)." }